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CVE-2026-31966

· Published 18/03/2026 20:16 · Modified 19/03/2026 14:44

Labels: CVE-2026-31966 2026-03-18CVE-2026-31966CWE-125[email protected]

Essential information

Published
18/03/2026 20:16
Modified
19/03/2026 14:44
Author
Creator
CVSS
6.9 MEDIUM (v3) 6.9 MEDIUM (v4.0)
CISA KEV
No
CWE
CVSS vector

CVSS metrics

Description

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. As one method of removing redundant data, CRAM uses reference-based compression so that instead of storing the full sequence for each alignment record it stores a location in an external reference sequence along with a list of differences to the reference at that location as a sequence of "features". When decoding CRAM records, the reference data is stored in a char array, and parts matching the alignment record sequence are copied over as necessary. Due to insufficient validation of the feature data series, it was possible to make the `cram_decode_seq()` function copy data from either before the start, or after the end of the stored reference either into the buffer used to store the output sequence for the cram record, or into the buffer used to build the SAM `MD` tag. This allowed arbitrary data to be leaked to the calling function. This bug may allow information about program state to be leaked. It may also cause a program crash through an attempt to access invalid memory. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue.

NVD status

Status
Analyzed — CVE has been recently published to the CVE List and has been received by the NVD.
Source
[email protected]
NVD
View on NVD

Affected products (CPE)

ProductCPE
htslib / htslib cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
htslib / htslib cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
htslib / htslib cpe:2.3:a:htslib:htslib:1.23:*:*:*:*:*:*:*

References